Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 KHSRPP1-201ENST00000427983 1768 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TNFSF4P23510 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AL390755.1-201ENST00000623716 2027 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TNFSF4P23510 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.46□□□□□ -0.41
TNFSF4P23510 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AC005740.2-201ENST00000511085 419 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TNFSF4P23510 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.46□□□□□ -0.41
TNFSF4P23510 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 RN7SL163P-201ENST00000583100 276 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.46□□□□□ -0.41
TNFSF4P23510 AL118558.3-201ENST00000607414 1079 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 MIR6799-201ENST00000620297 69 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 AL008638.5-201ENST00000623814 1298 ntBASIC12.46□□□□□ -0.41
TNFSF4P23510 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.46□□□□□ -0.41
TNFSF4P23510 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TNFSF4P23510 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.46□□□□□ -0.41
TNFSF4P23510 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
TNFSF4P23510 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
TNFSF4P23510 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TNFSF4P23510 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TNFSF4P23510 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TNFSF4P23510 MYADML-201ENST00000474610 2147 ntBASIC12.46□□□□□ -0.42
TNFSF4P23510 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
TNFSF4P23510 PTENP1-202ENST00000532280 3996 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TNFSF4P23510 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 KRT8P28-201ENST00000433288 1390 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 AC244394.1-201ENST00000435000 1665 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 AC004898.1-201ENST00000451057 766 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.45□□□□□ -0.42
TNFSF4P23510 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 AP001258.2-201ENST00000529891 490 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AC008805.1-201ENST00000590892 364 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms