Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 AL445209.1-201ENST00000607269 3491 ntBASIC12.77□□□□□ -0.37
ATF1P18846 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ATF1P18846 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.77□□□□□ -0.37
ATF1P18846 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 MEX3B-202ENST00000558133 4333 ntBASIC12.76□□□□□ -0.37
ATF1P18846 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 PMS2P2-201ENST00000425039 1128 ntBASIC12.76□□□□□ -0.37
ATF1P18846 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 AL162726.2-201ENST00000438986 1017 ntBASIC12.76□□□□□ -0.37
ATF1P18846 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.76□□□□□ -0.37
ATF1P18846 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.76□□□□□ -0.37
ATF1P18846 SORD2P-201ENST00000558556 1069 ntBASIC12.76□□□□□ -0.37
ATF1P18846 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 AC006538.3-201ENST00000612495 578 ntBASIC12.76□□□□□ -0.37
ATF1P18846 CU634019.7-201ENST00000624153 1185 ntBASIC12.76□□□□□ -0.37
ATF1P18846 FP236241.2-201ENST00000624906 1185 ntBASIC12.76□□□□□ -0.37
ATF1P18846 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.76□□□□□ -0.37
ATF1P18846 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ATF1P18846 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ATF1P18846 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATF1P18846 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms