Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 VDAC1P1-201ENST00000439229 848 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 AL035414.1-201ENST00000451327 857 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 RCC2P8-201ENST00000502779 1035 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 AC134698.3-201ENST00000523880 214 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 AC090857.1-201ENST00000527400 390 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 AC009779.1-201ENST00000551138 283 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CPNE6O95741 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.26□□□□□ -0.13
CPNE6O95741 RN7SL574P-201ENST00000581512 297 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 MIR6720-201ENST00000611664 98 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 AC027601.3-201ENST00000622907 509 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 AC105206.1-202ENST00000314927 2368 ntBASIC14.26□□□□□ -0.13
CPNE6O95741 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CPNE6O95741 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE6O95741 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CPNE6O95741 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CPNE6O95741 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 HINT2P1-201ENST00000419438 481 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 KLF2P1-201ENST00000447438 1042 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 AL353637.1-201ENST00000451571 732 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.25□□□□□ -0.13
CPNE6O95741 AL353726.2-201ENST00000623259 884 ntBASIC14.25□□□□□ -0.13
CPNE6O95741 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE6O95741 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CPNE6O95741 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CPNE6O95741 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE6O95741 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms