Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 OR6D1P-202ENST00000641007 5290 ntBASIC19.67■□□□□ 0.74
NPHP4O75161 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC19.67■□□□□ 0.74
NPHP4O75161 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NPHP4O75161 THAP4-203ENST00000402545 833 ntTSL 5 BASIC19.67■□□□□ 0.74
NPHP4O75161 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC19.67■□□□□ 0.74
NPHP4O75161 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC19.67■□□□□ 0.74
NPHP4O75161 AF186996.6-201ENST00000485294 149 ntBASIC19.67■□□□□ 0.74
NPHP4O75161 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC19.67■□□□□ 0.74
NPHP4O75161 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC19.67■□□□□ 0.74
NPHP4O75161 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC19.67■□□□□ 0.74
NPHP4O75161 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC19.67■□□□□ 0.74
NPHP4O75161 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NPHP4O75161 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.66■□□□□ 0.74
NPHP4O75161 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC19.66■□□□□ 0.74
NPHP4O75161 SNU13-204ENST00000402458 462 ntTSL 3 BASIC19.66■□□□□ 0.74
NPHP4O75161 SNORD88B-201ENST00000408454 91 ntBASIC19.66■□□□□ 0.74
NPHP4O75161 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC19.66■□□□□ 0.74
NPHP4O75161 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC19.66■□□□□ 0.74
NPHP4O75161 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC104212.2-201ENST00000478813 628 ntBASIC19.66■□□□□ 0.74
NPHP4O75161 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC19.66■□□□□ 0.74
NPHP4O75161 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC19.66■□□□□ 0.74
NPHP4O75161 COG6-212ENST00000630730 186 ntTSL 5 BASIC19.66■□□□□ 0.74
NPHP4O75161 GUCY2EP-203ENST00000531117 1918 ntBASIC19.66■□□□□ 0.74
NPHP4O75161 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPHP4O75161 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
NPHP4O75161 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.65■□□□□ 0.74
NPHP4O75161 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 AC018442.1-201ENST00000421439 2061 ntBASIC19.65■□□□□ 0.74
NPHP4O75161 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 POP5-201ENST00000341039 913 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NPHP4O75161 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC19.65■□□□□ 0.74
NPHP4O75161 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC19.65■□□□□ 0.74
NPHP4O75161 KRT18P15-201ENST00000458108 1291 ntBASIC19.65■□□□□ 0.74
NPHP4O75161 RN7SL794P-201ENST00000469816 280 ntBASIC19.65■□□□□ 0.74
NPHP4O75161 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.65■□□□□ 0.74
NPHP4O75161 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC19.65■□□□□ 0.74
NPHP4O75161 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC19.65■□□□□ 0.74
NPHP4O75161 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.65■□□□□ 0.74
NPHP4O75161 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPHP4O75161 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NPHP4O75161 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPHP4O75161 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPHP4O75161 AL139158.3-201ENST00000641212 1562 ntBASIC19.64■□□□□ 0.74
NPHP4O75161 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms