Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AL035633.1-201ENST00000406139 838 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC112492.5-201ENST00000421897 457 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 CR383656.12-201ENST00000549567 513 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AP006547.1-201ENST00000563435 692 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 FAM90A12P-201ENST00000519497 2375 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 FAM90A24P-201ENST00000520792 2369 ntBASIC11.68□□□□□ -0.54
SRRM4A7MD48 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SRRM4A7MD48 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
SRRM4A7MD48 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 HOMER2P2-201ENST00000451621 847 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 COX20P2-201ENST00000452636 358 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC100850.1-201ENST00000506768 649 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC005225.4-201ENST00000557330 545 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms