Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AGAP12P-201ENST00000585227 2359 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 EIF3FP3-201ENST00000434851 1086 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC125807.1-201ENST00000483097 614 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 RPL13AP25-201ENST00000484130 612 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 GCOM2-201ENST00000509133 1104 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 LRRC59-203ENST00000576448 1531 ntBASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AL139385.1-201ENST00000611744 3272 ntBASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 TNRC18P1-201ENST00000502875 3650 ntBASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AP001582.1-201ENST00000525856 295 ntBASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 RARRES2P5-201ENST00000564013 466 ntBASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV18A0A075B6X5 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms