Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SPDYE7P-202ENST00000420373 878 ntBASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AL158212.4-201ENST00000624062 1286 ntBASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AL359845.1-201ENST00000458202 1648 ntBASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AL445250.1-201ENST00000641671 2259 ntBASIC13.74□□□□□ -0.21
AP4S1Q9Y587 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 AC005014.1-201ENST00000432006 2976 ntBASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP4S1Q9Y587 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.73□□□□□ -0.21
AP4S1Q9Y587 GCOM2-201ENST00000509133 1104 ntBASIC13.73□□□□□ -0.21
AP4S1Q9Y587 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms