Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 TSEN15P1-201ENST00000423257 515 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 AC005237.2-201ENST00000434368 219 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 AL592309.1-201ENST00000443127 649 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 AC079140.1-201ENST00000508039 487 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 KRT8P48-201ENST00000515599 1220 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IGHV3-62-201ENST00000520057 340 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 SAMD11P1-201ENST00000571429 661 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 AC027612.4-201ENST00000605371 583 ntBASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRCH1Q9Y2L9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.83□□□□□ -0.19
LRCH1Q9Y2L9 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LRCH1Q9Y2L9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.83□□□□□ -0.19
LRCH1Q9Y2L9 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AL133267.1-201ENST00000398220 340 ntBASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AL627223.1-201ENST00000416693 442 ntBASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 RNA5SP410-201ENST00000516285 106 ntBASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AC026979.3-201ENST00000607315 403 ntBASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AC009093.7-201ENST00000623853 1223 ntBASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRCH1Q9Y2L9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AL157414.3-201ENST00000624276 1954 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms