Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FAM90A2P-201ENST00000511144 1395 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 FAM90A25P-201ENST00000528404 1395 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC091046.1-201ENST00000331871 207 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 OR2K2-202ENST00000374428 1038 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC092506.1-202ENST00000401022 528 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC092580.1-201ENST00000433998 658 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 EEF1DP6-201ENST00000449232 372 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 RN7SL67P-201ENST00000492147 296 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC008723.1-201ENST00000506922 207 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 PRKXP1-201ENST00000561423 1122 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 LINC01783-202ENST00000614408 828 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 BX284668.2-205ENST00000619677 828 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC026320.2-201ENST00000434379 478 ntBASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 RN7SL530P-201ENST00000485097 298 ntBASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 IGLV3-15-201ENST00000518356 244 ntBASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 AC064801.2-201ENST00000625052 1303 ntBASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLCF1Q9UBD9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms