Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 CNN2P10-201ENST00000443067 918 ntBASIC13.28□□□□□ -0.28
EMC3Q9P0I2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 PPY2P-201ENST00000582808 702 ntBASIC13.28□□□□□ -0.28
EMC3Q9P0I2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.28□□□□□ -0.28
EMC3Q9P0I2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.27□□□□□ -0.28
EMC3Q9P0I2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 AC131902.2-201ENST00000566892 2172 ntBASIC13.27□□□□□ -0.28
EMC3Q9P0I2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EMC3Q9P0I2 PPT1-213ENST00000641319 2388 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AC004945.1-201ENST00000416738 983 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 C2orf69P2-201ENST00000562032 1123 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AC073413.1-201ENST00000603927 732 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 AC089987.1-201ENST00000551654 2209 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 MTHFR-210ENST00000641407 2387 ntBASIC13.27□□□□□ -0.29
EMC3Q9P0I2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EMC3Q9P0I2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.26□□□□□ -0.29
EMC3Q9P0I2 RN7SKP230-201ENST00000365642 335 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms