Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC018529.2-202ENST00000611482 3087 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TIMMDC1Q9NPL8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 AP001972.5-201ENST00000624624 2338 ntBASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TIMMDC1Q9NPL8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 AC055811.4-201ENST00000624039 1754 ntBASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 ANKRD19P-201ENST00000338192 862 ntBASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TIMMDC1Q9NPL8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms