Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 AL122018.1-201ENST00000446607 2310 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 CYMP-203ENST00000474680 1263 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 TDH-203ENST00000531764 1110 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV9Q99603 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV9Q99603 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.32□□□□□ -0.6
TRGV9Q99603 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 AC027601.3-201ENST00000622907 509 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 NCLP1-201ENST00000445357 1963 ntBASIC11.32□□□□□ -0.6
TRGV9Q99603 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
TRGV9Q99603 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV9Q99603 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV9Q99603 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TRGV9Q99603 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV9Q99603 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV9Q99603 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV9Q99603 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV9Q99603 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms