Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 RNA5SP359-201ENST00000364838 113 ntBASIC20.85■□□□□ 0.93
SIN3AQ96ST3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 ISCA2P1-201ENST00000425548 448 ntBASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CALR4P-201ENST00000431943 946 ntBASIC20.85■□□□□ 0.93
SIN3AQ96ST3 AC073150.1-201ENST00000450406 1084 ntBASIC20.85■□□□□ 0.93
SIN3AQ96ST3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 AL928654.5-201ENST00000624831 2501 ntBASIC20.85■□□□□ 0.93
SIN3AQ96ST3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 AC011742.3-201ENST00000439053 820 ntBASIC20.84■□□□□ 0.93
SIN3AQ96ST3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 LINC01815-202ENST00000641468 1409 ntBASIC20.84■□□□□ 0.93
SIN3AQ96ST3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 KRT8P24-201ENST00000560290 1559 ntBASIC20.84■□□□□ 0.93
SIN3AQ96ST3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
SIN3AQ96ST3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 OR8T1P-201ENST00000421347 918 ntBASIC20.83■□□□□ 0.93
SIN3AQ96ST3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 AC022494.1-201ENST00000466044 728 ntBASIC20.83■□□□□ 0.93
SIN3AQ96ST3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIN3AQ96ST3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIN3AQ96ST3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC20.82■□□□□ 0.92
SIN3AQ96ST3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms