Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ACTBP8-201ENST00000403258 1108 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 DUX4L47-201ENST00000566374 394 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MIR3197-201ENST00000582241 73 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AC025048.6-201ENST00000634326 1161 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AL356585.2-201ENST00000625078 2396 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTN4IP1Q8WWV3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AC093433.1-201ENST00000458048 571 ntBASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 GIMAP3P-201ENST00000495150 836 ntBASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AC022137.2-201ENST00000503482 481 ntBASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 KRT8P35-201ENST00000483942 1338 ntBASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.27□□□□□ -0.45
RTN4IP1Q8WWV3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms