Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AC079178.1-201ENST00000420915 656 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 HLA-V-201ENST00000429037 534 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AL157407.1-201ENST00000435784 904 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 CSF2RBP1-201ENST00000447905 391 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AC244157.2-201ENST00000616239 1006 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AC010327.5-201ENST00000586923 3061 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 AC138969.2-201ENST00000532739 9932 ntBASIC13.58□□□□□ -0.23
NUP43Q8NFH3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
NUP43Q8NFH3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC131212.3-201ENST00000624087 4219 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AL022313.4-201ENST00000562756 2046 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AL645933.1-201ENST00000440087 609 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 GPR53P-205ENST00000457298 1084 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 RBM8B-201ENST00000555532 525 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC009955.4-201ENST00000597192 544 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AC244394.1-201ENST00000435000 1665 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AL008718.2-201ENST00000609206 1313 ntBASIC13.58□□□□□ -0.24
NUP43Q8NFH3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.58□□□□□ -0.24
NUP43Q8NFH3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms