Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 RN7SL774P-201ENST00000577467 290 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AL136301.1-201ENST00000615830 422 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AL023803.2-201ENST00000620080 638 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AC091812.3-201ENST00000621362 345 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AC022748.3-201ENST00000621828 275 ntBASIC15.27■□□□□ 0.04
CCDC33Q8N5R6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC33Q8N5R6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AC015802.1-201ENST00000588104 1449 ntBASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AC104073.2-201ENST00000453737 312 ntBASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AC022217.1-201ENST00000521069 738 ntBASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC33Q8N5R6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 MRPL37P1-201ENST00000592451 1337 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 CICP16-201ENST00000502609 2813 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 DPM3-202ENST00000368399 517 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 HINT2P1-201ENST00000419438 481 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 TLE1P1-201ENST00000422965 589 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 RN7SL720P-201ENST00000488178 304 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 AC106794.1-201ENST00000506935 792 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 GCOM2-201ENST00000509133 1104 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms