Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF135Q8IUD6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC136759.1-202ENST00000530858 2194 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC009093.2-202ENST00000620513 2079 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 BAK1P1-201ENST00000317045 636 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC026434.2-201ENST00000506094 1078 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC012158.2-201ENST00000536546 354 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC005962.1-201ENST00000584100 773 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 MIR4522-201ENST00000584932 87 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AL009178.2-201ENST00000597278 2719 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC015656.1-201ENST00000624209 3578 ntBASIC15.41■□□□□ 0.06
RNF135Q8IUD6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF135Q8IUD6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 LILRP1-201ENST00000444199 1370 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PSMD4P1-201ENST00000433951 1109 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AC024293.1-201ENST00000467930 498 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AC009884.2-201ENST00000603110 324 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 AL157813.1-201ENST00000612996 587 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms