Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TRIM80P-201ENST00000455685 2848 ntBASIC12.1□□□□□ -0.47
ZNF546Q86UE3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RPL13AP23-201ENST00000480739 586 ntBASIC12.1□□□□□ -0.47
ZNF546Q86UE3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 LINC01225-203ENST00000563550 1244 ntBASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AC092902.6-201ENST00000641783 218 ntBASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AC073957.3-201ENST00000609998 6758 ntBASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AL021155.1-201ENST00000438808 2637 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC110048.1-201ENST00000604293 2157 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC026271.4-201ENST00000578214 1833 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC012531.1-201ENST00000562848 2680 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 MED15P5-201ENST00000423150 992 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC005014.1-201ENST00000432006 2976 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 TIMM8BP1-201ENST00000452384 211 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 SLC25A39P2-201ENST00000537614 270 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC084121.4-201ENST00000641598 221 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AF228730.8-201ENST00000642140 221 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms