Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC006033.1-201ENST00000440505 426 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC008805.1-201ENST00000590892 364 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 BNIP3P13-201ENST00000599968 566 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC144522.1-201ENST00000625111 1658 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 DGCR9-201ENST00000609630 2415 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC006122.1-201ENST00000493323 440 ntBASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 SCARNA21-201ENST00000517026 139 ntBASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC005586.2-201ENST00000563946 837 ntBASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC103810.3-201ENST00000583567 96 ntBASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 CICP8-201ENST00000455800 2813 ntBASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD3Q7Z3D4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD3Q7Z3D4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.58□□□□□ -0.07
LYSMD3Q7Z3D4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
LYSMD3Q7Z3D4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD3Q7Z3D4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD3Q7Z3D4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms