Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RPS9P1-201ENST00000419943 583 ntBASIC18.71■□□□□ 0.59
CCDC27Q2M243 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 FNTAP2-201ENST00000430308 634 ntBASIC18.71■□□□□ 0.59
CCDC27Q2M243 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 AC099548.2-209ENST00000480264 625 ntBASIC18.71■□□□□ 0.59
CCDC27Q2M243 RN7SL277P-201ENST00000481521 288 ntBASIC18.71■□□□□ 0.59
CCDC27Q2M243 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 AC244093.1-201ENST00000610837 814 ntBASIC18.71■□□□□ 0.59
CCDC27Q2M243 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC27Q2M243 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC27Q2M243 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC27Q2M243 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 RN7SL530P-201ENST00000485097 298 ntBASIC18.7■□□□□ 0.58
CCDC27Q2M243 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 NDUFV2P1-201ENST00000596415 907 ntBASIC18.7■□□□□ 0.58
CCDC27Q2M243 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 MIR6787-201ENST00000616675 61 ntBASIC18.7■□□□□ 0.58
CCDC27Q2M243 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC27Q2M243 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC27Q2M243 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ISCA2P1-201ENST00000425548 448 ntBASIC18.69■□□□□ 0.58
CCDC27Q2M243 CALR4P-201ENST00000431943 946 ntBASIC18.69■□□□□ 0.58
CCDC27Q2M243 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 SPTLC1P5-201ENST00000450718 252 ntBASIC18.69■□□□□ 0.58
CCDC27Q2M243 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC27Q2M243 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC27Q2M243 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms