Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP7AQ04656 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 RPSAP6-201ENST00000417882 882 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP7AQ04656 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP7AQ04656 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 AC016582.2-202ENST00000587765 1094 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
ATP7AQ04656 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP7AQ04656 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP7AQ04656 CDK4P1-201ENST00000454213 828 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 RN7SL523P-201ENST00000484401 298 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 AC147876.1-201ENST00000504408 322 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP7AQ04656 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP7AQ04656 RN7SL605P-201ENST00000577229 281 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 RN7SL602P-201ENST00000578326 324 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 RN7SL718P-201ENST00000581254 303 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 NEK4P3-201ENST00000604859 544 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP7AQ04656 AC048382.6-201ENST00000621980 1223 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 AL139424.3-202ENST00000641619 917 ntBASIC20.73■□□□□ 0.91
ATP7AQ04656 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 POLL-206ENST00000370172 2308 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP7AQ04656 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP7AQ04656 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP7AQ04656 AC041040.1-201ENST00000425197 460 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 RNA5SP420-201ENST00000516997 137 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 SRPK2P-201ENST00000523408 1100 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP7AQ04656 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 RN7SL524P-201ENST00000581152 300 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 AC005746.3-201ENST00000614751 393 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC20.72■□□□□ 0.91
ATP7AQ04656 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP7AQ04656 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP7AQ04656 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP7AQ04656 AC103702.1-201ENST00000548801 2630 ntBASIC20.71■□□□□ 0.91
ATP7AQ04656 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATP7AQ04656 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 AIG1-203ENST00000367596 559 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 SNU13-204ENST00000402458 462 ntTSL 3 BASIC20.71■□□□□ 0.91
ATP7AQ04656 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 AC010086.2-201ENST00000428616 226 ntBASIC20.71■□□□□ 0.91
ATP7AQ04656 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP7AQ04656 RPSAP70-201ENST00000504462 864 ntBASIC20.71■□□□□ 0.91
ATP7AQ04656 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP7AQ04656 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.71■□□□□ 0.91
ATP7AQ04656 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATP7AQ04656 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms