Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 HSPA7-201ENST00000445535 1927 ntBASIC14.55□□□□□ -0.08
AP1S1P61966 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
AP1S1P61966 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 AC239868.1-201ENST00000369385 493 ntBASIC14.55□□□□□ -0.08
AP1S1P61966 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.55□□□□□ -0.08
AP1S1P61966 AL596276.2-201ENST00000447525 331 ntBASIC14.55□□□□□ -0.08
AP1S1P61966 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.55□□□□□ -0.08
AP1S1P61966 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
AP1S1P61966 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.55□□□□□ -0.08
AP1S1P61966 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S1P61966 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 CCT8L1P-201ENST00000465400 1674 ntBASIC14.55□□□□□ -0.08
AP1S1P61966 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S1P61966 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S1P61966 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 AC139749.1-202ENST00000617529 3139 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.54□□□□□ -0.08
AP1S1P61966 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 SPTLC1P5-201ENST00000450718 252 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.54□□□□□ -0.08
AP1S1P61966 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 RN7SL774P-201ENST00000577467 290 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.54□□□□□ -0.08
AP1S1P61966 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.54□□□□□ -0.08
AP1S1P61966 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S1P61966 AL022313.4-201ENST00000562756 2046 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 AL136379.1-201ENST00000623471 2642 ntBASIC14.54□□□□□ -0.08
AP1S1P61966 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms