Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SPCS3P61009 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SPCS3P61009 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SPCS3P61009 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 RNU1-114P-201ENST00000365297 166 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.9□□□□□ -0.5
SPCS3P61009 AP001582.1-201ENST00000525856 295 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 AC131206.1-201ENST00000538078 1211 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.9□□□□□ -0.5
SPCS3P61009 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.9□□□□□ -0.5
SPCS3P61009 SPDYE22P-201ENST00000582158 798 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
SPCS3P61009 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 AC022144.1-201ENST00000602255 1580 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 AC008738.7-201ENST00000609744 511 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 AC004840.1-201ENST00000636359 365 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.9□□□□□ -0.5
SPCS3P61009 LRRC59-203ENST00000576448 1531 ntBASIC11.9□□□□□ -0.5
SPCS3P61009 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SPCS3P61009 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SPCS3P61009 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SPCS3P61009 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.9□□□□□ -0.51
SPCS3P61009 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
SPCS3P61009 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SPCS3P61009 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SPCS3P61009 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.89□□□□□ -0.51
SPCS3P61009 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.89□□□□□ -0.51
SPCS3P61009 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.89□□□□□ -0.51
SPCS3P61009 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SPCS3P61009 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms