Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 AL359845.1-201ENST00000458202 1648 ntBASIC12.49□□□□□ -0.41
AP3S2P59780 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP3S2P59780 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S2P59780 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 AK2P2-201ENST00000439142 405 ntBASIC12.49□□□□□ -0.41
AP3S2P59780 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.49□□□□□ -0.41
AP3S2P59780 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.49□□□□□ -0.41
AP3S2P59780 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.49□□□□□ -0.41
AP3S2P59780 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 AP001005.1-201ENST00000571755 1248 ntBASIC12.49□□□□□ -0.41
AP3S2P59780 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 AC105339.1-204ENST00000636249 355 ntBASIC12.49□□□□□ -0.41
AP3S2P59780 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 AGAP12P-201ENST00000585227 2359 ntBASIC12.49□□□□□ -0.41
AP3S2P59780 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S2P59780 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 AC125807.2-201ENST00000513358 3514 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 AC104109.2-201ENST00000602919 1418 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 TUBB3P1-201ENST00000405796 1332 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 AC004832.2-201ENST00000426397 482 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 ACTG1P14-201ENST00000446382 1122 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.48□□□□□ -0.41
AP3S2P59780 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S2P59780 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 AL662844.1-201ENST00000546340 181 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 AC145285.3-201ENST00000564603 959 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 DUX4L47-201ENST00000566374 394 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.48□□□□□ -0.41
AP3S2P59780 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 BAP1-211ENST00000615113 489 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 AL603764.1-201ENST00000636452 321 ntBASIC12.48□□□□□ -0.41
AP3S2P59780 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S2P59780 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms