Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 GOLGA2P7-209ENST00000560408 745 ntBASIC12.13□□□□□ -0.47
RIPPLY3P57055 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 AC010976.2-201ENST00000609697 852 ntBASIC12.13□□□□□ -0.47
RIPPLY3P57055 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RIPPLY3P57055 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RIPPLY3P57055 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 MIR611-201ENST00000384869 67 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 RN7SL87P-201ENST00000497657 288 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC140113.1-201ENST00000603467 169 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 MEG3_2.1-201ENST00000611456 105 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 AC009560.1-201ENST00000620208 434 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.12□□□□□ -0.47
RIPPLY3P57055 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RIPPLY3P57055 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RIPPLY3P57055 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RIPPLY3P57055 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.11□□□□□ -0.47
RIPPLY3P57055 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.11□□□□□ -0.47
RIPPLY3P57055 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
RIPPLY3P57055 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms