Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATXN3P54252 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.94□□□□□ -0.02
ATXN3P54252 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ATXN3P54252 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATXN3P54252 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATXN3P54252 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ATXN3P54252 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
ATXN3P54252 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATXN3P54252 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.94□□□□□ -0.02
ATXN3P54252 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.94□□□□□ -0.02
ATXN3P54252 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.94□□□□□ -0.02
ATXN3P54252 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ATXN3P54252 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ATXN3P54252 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 AL136309.1-201ENST00000403917 691 ntBASIC14.93□□□□□ -0.02
ATXN3P54252 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 TUBB8P8-201ENST00000458717 1058 ntBASIC14.93□□□□□ -0.02
ATXN3P54252 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.93□□□□□ -0.02
ATXN3P54252 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.93□□□□□ -0.02
ATXN3P54252 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 AL161670.2-201ENST00000557650 1227 ntBASIC14.93□□□□□ -0.02
ATXN3P54252 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.93□□□□□ -0.02
ATXN3P54252 AL645939.5-201ENST00000606834 243 ntBASIC14.93□□□□□ -0.02
ATXN3P54252 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ACE3P-201ENST00000423435 1973 ntBASIC14.93□□□□□ -0.02
ATXN3P54252 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ATXN3P54252 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATXN3P54252 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 GHSR-202ENST00000427970 912 ntBASIC14.92□□□□□ -0.02
ATXN3P54252 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 RNMTL1P1-201ENST00000454103 560 ntBASIC14.92□□□□□ -0.02
ATXN3P54252 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.92□□□□□ -0.02
ATXN3P54252 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.92□□□□□ -0.02
ATXN3P54252 AL603764.1-201ENST00000636452 321 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms