Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.87■□□□□ 0.13
CPT1AP50416 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 RN7SL788P-201ENST00000460504 316 ntBASIC15.87■□□□□ 0.13
CPT1AP50416 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.87■□□□□ 0.13
CPT1AP50416 AC022447.6-201ENST00000515522 438 ntBASIC15.87■□□□□ 0.13
CPT1AP50416 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.87■□□□□ 0.13
CPT1AP50416 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.87■□□□□ 0.13
CPT1AP50416 KLF17P1-201ENST00000547105 1126 ntBASIC15.87■□□□□ 0.13
CPT1AP50416 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.87■□□□□ 0.13
CPT1AP50416 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 AC006158.1-201ENST00000610661 249 ntBASIC15.87■□□□□ 0.13
CPT1AP50416 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPT1AP50416 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.87■□□□□ 0.13
CPT1AP50416 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CPT1AP50416 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.86■□□□□ 0.13
CPT1AP50416 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.86■□□□□ 0.13
CPT1AP50416 AC025183.3-201ENST00000623526 1482 ntBASIC15.86■□□□□ 0.13
CPT1AP50416 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CPT1AP50416 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.86■□□□□ 0.13
CPT1AP50416 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.86■□□□□ 0.13
CPT1AP50416 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.86■□□□□ 0.13
CPT1AP50416 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.86■□□□□ 0.13
CPT1AP50416 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 AL512310.5-201ENST00000551999 515 ntBASIC15.86■□□□□ 0.13
CPT1AP50416 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CPT1AP50416 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CPT1AP50416 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.86■□□□□ 0.13
CPT1AP50416 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
CPT1AP50416 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPT1AP50416 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 RPL13AP3-202ENST00000494676 1473 ntBASIC15.85■□□□□ 0.13
CPT1AP50416 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.85■□□□□ 0.13
CPT1AP50416 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPT1AP50416 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms