Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.12■□□□□ 0.01
MTHFRP42898 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.12■□□□□ 0.01
MTHFRP42898 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.12■□□□□ 0.01
MTHFRP42898 RN7SL596P-201ENST00000582123 288 ntBASIC15.12■□□□□ 0.01
MTHFRP42898 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.12■□□□□ 0.01
MTHFRP42898 AC006158.1-201ENST00000610661 249 ntBASIC15.12■□□□□ 0.01
MTHFRP42898 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 AC244250.3-201ENST00000620749 366 ntBASIC15.12■□□□□ 0.01
MTHFRP42898 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 AL451007.2-201ENST00000632004 563 ntBASIC15.12■□□□□ 0.01
MTHFRP42898 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.12■□□□□ 0.01
MTHFRP42898 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MTHFRP42898 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.12■□□□□ 0.01
MTHFRP42898 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.11■□□□□ 0.01
MTHFRP42898 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MTHFRP42898 MROH4P-201ENST00000431302 1578 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MTHFRP42898 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MTHFRP42898 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MTHFRP42898 AC092135.3-201ENST00000624151 1846 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MTHFRP42898 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 ST13P19-201ENST00000442505 1124 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 RPL35P9-201ENST00000446059 350 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 RN7SL277P-201ENST00000481521 288 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 OR5BD1P-201ENST00000532527 817 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.11■□□□□ 0.01
MTHFRP42898 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 AL591471.1-201ENST00000621855 229 ntBASIC15.11■□□□□ 0.01
MTHFRP42898 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MTHFRP42898 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
MTHFRP42898 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MTHFRP42898 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.1■□□□□ 0.01
MTHFRP42898 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MTHFRP42898 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms