Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
GDNFP39905 AL096865.1-201ENST00000606796 927 ntBASIC12.71□□□□□ -0.37
GDNFP39905 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GDNFP39905 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.71□□□□□ -0.37
GDNFP39905 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.71□□□□□ -0.38
GDNFP39905 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GDNFP39905 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GDNFP39905 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GDNFP39905 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.71□□□□□ -0.38
GDNFP39905 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.71□□□□□ -0.38
GDNFP39905 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GDNFP39905 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.71□□□□□ -0.38
GDNFP39905 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.71□□□□□ -0.38
GDNFP39905 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 AC236430.1-201ENST00000402231 743 ntBASIC12.7□□□□□ -0.38
GDNFP39905 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 HLA-K-203ENST00000430151 1046 ntBASIC12.7□□□□□ -0.38
GDNFP39905 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 RN7SL399P-201ENST00000471648 279 ntBASIC12.7□□□□□ -0.38
GDNFP39905 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.7□□□□□ -0.38
GDNFP39905 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.7□□□□□ -0.38
GDNFP39905 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.7□□□□□ -0.38
GDNFP39905 AC036164.1-201ENST00000570544 333 ntBASIC12.7□□□□□ -0.38
GDNFP39905 RN7SL204P-201ENST00000582831 262 ntBASIC12.7□□□□□ -0.38
GDNFP39905 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.7□□□□□ -0.38
GDNFP39905 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 LINC02560-201ENST00000596379 459 ntBASIC12.7□□□□□ -0.38
GDNFP39905 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.7□□□□□ -0.38
GDNFP39905 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
GDNFP39905 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 KHSRPP1-201ENST00000427983 1768 ntBASIC12.7□□□□□ -0.38
GDNFP39905 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
GDNFP39905 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.7□□□□□ -0.38
GDNFP39905 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
GDNFP39905 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GDNFP39905 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GDNFP39905 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
GDNFP39905 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.69□□□□□ -0.38
GDNFP39905 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.69□□□□□ -0.38
GDNFP39905 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GDNFP39905 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GDNFP39905 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GDNFP39905 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GDNFP39905 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.69□□□□□ -0.38
GDNFP39905 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.69□□□□□ -0.38
GDNFP39905 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GDNFP39905 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms