Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.06■□□□□ 0.48
COL15A1P39059 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.06■□□□□ 0.48
COL15A1P39059 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.06■□□□□ 0.48
COL15A1P39059 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
COL15A1P39059 AP005264.6-204ENST00000588436 719 ntBASIC18.06■□□□□ 0.48
COL15A1P39059 AP005264.5-201ENST00000590066 467 ntBASIC18.06■□□□□ 0.48
COL15A1P39059 HMGB1P24-201ENST00000611897 328 ntBASIC18.06■□□□□ 0.48
COL15A1P39059 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.06■□□□□ 0.48
COL15A1P39059 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
COL15A1P39059 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL15A1P39059 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL15A1P39059 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 GRPEL2P1-201ENST00000453145 339 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.05■□□□□ 0.48
COL15A1P39059 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 FAM86B3P-203ENST00000523992 854 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.05■□□□□ 0.48
COL15A1P39059 SNORD3B-1-201ENST00000577988 758 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.05■□□□□ 0.48
COL15A1P39059 PEBP1P2-201ENST00000603980 558 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 KRT8P18-201ENST00000413425 1445 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 LINC00115-201ENST00000473798 1317 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 ODCP-201ENST00000459650 1639 ntBASIC18.05■□□□□ 0.48
COL15A1P39059 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COL15A1P39059 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.05■□□□□ 0.48
COL15A1P39059 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.05■□□□□ 0.48
COL15A1P39059 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.05■□□□□ 0.48
COL15A1P39059 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL15A1P39059 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.04■□□□□ 0.48
COL15A1P39059 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 KRT18P46-201ENST00000435568 1279 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 TREHP1-201ENST00000531328 465 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 AC013553.1-201ENST00000560906 267 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 AC006483.2-201ENST00000609813 515 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.04■□□□□ 0.48
COL15A1P39059 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms