Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
USP6P35125 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
USP6P35125 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.09■□□□□ 0.65
USP6P35125 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 PES1P2-201ENST00000449745 1735 ntBASIC19.09■□□□□ 0.65
USP6P35125 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 AC015802.1-201ENST00000588104 1449 ntBASIC19.09■□□□□ 0.65
USP6P35125 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 AC022080.1-201ENST00000366255 781 ntBASIC19.08■□□□□ 0.65
USP6P35125 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.08■□□□□ 0.65
USP6P35125 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.08■□□□□ 0.65
USP6P35125 FAM21EP-201ENST00000417804 985 ntBASIC19.08■□□□□ 0.65
USP6P35125 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.08■□□□□ 0.65
USP6P35125 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.08■□□□□ 0.65
USP6P35125 ABHD17AP9-201ENST00000561925 548 ntBASIC19.08■□□□□ 0.65
USP6P35125 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC19.08■□□□□ 0.65
USP6P35125 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP6P35125 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.08■□□□□ 0.65
USP6P35125 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP6P35125 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP6P35125 AC012617.1-204ENST00000586340 2305 ntBASIC19.08■□□□□ 0.65
USP6P35125 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP6P35125 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP6P35125 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
USP6P35125 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.08■□□□□ 0.64
USP6P35125 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.08■□□□□ 0.64
USP6P35125 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.08■□□□□ 0.64
USP6P35125 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.08■□□□□ 0.64
USP6P35125 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.08■□□□□ 0.64
USP6P35125 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP6P35125 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
USP6P35125 AP005212.2-201ENST00000584979 510 ntBASIC19.08■□□□□ 0.64
USP6P35125 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.08■□□□□ 0.64
USP6P35125 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
USP6P35125 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 GGTLC4P-201ENST00000402176 664 ntBASIC19.07■□□□□ 0.64
USP6P35125 ACTBP14-201ENST00000411655 1089 ntBASIC19.07■□□□□ 0.64
USP6P35125 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.07■□□□□ 0.64
USP6P35125 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC19.07■□□□□ 0.64
USP6P35125 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
USP6P35125 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.07■□□□□ 0.64
USP6P35125 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.07■□□□□ 0.64
USP6P35125 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 AL160191.2-201ENST00000603975 601 ntBASIC19.07■□□□□ 0.64
USP6P35125 AC126755.5-201ENST00000622756 267 ntBASIC19.07■□□□□ 0.64
USP6P35125 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.07■□□□□ 0.64
USP6P35125 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP6P35125 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
USP6P35125 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms