Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MBLAC2-202ENST00000514906 1936 ntBASIC13.78□□□□□ -0.2
MMP11P24347 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 AGGF1P1-201ENST00000509500 2073 ntBASIC13.78□□□□□ -0.2
MMP11P24347 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
MMP11P24347 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 RN7SKP214-201ENST00000364208 315 ntBASIC13.78□□□□□ -0.2
MMP11P24347 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP11P24347 AL157407.1-201ENST00000435784 904 ntBASIC13.78□□□□□ -0.2
MMP11P24347 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP11P24347 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.78□□□□□ -0.2
MMP11P24347 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 AC024681.1-201ENST00000521917 487 ntBASIC13.78□□□□□ -0.2
MMP11P24347 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 AC009779.1-201ENST00000551138 283 ntBASIC13.78□□□□□ -0.2
MMP11P24347 CHMP4BP1-201ENST00000556017 588 ntBASIC13.78□□□□□ -0.2
MMP11P24347 AL160314.3-201ENST00000556041 767 ntBASIC13.78□□□□□ -0.2
MMP11P24347 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 AL161670.2-201ENST00000557650 1227 ntBASIC13.78□□□□□ -0.2
MMP11P24347 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP11P24347 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP11P24347 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP11P24347 AC005962.1-201ENST00000584100 773 ntBASIC13.78□□□□□ -0.2
MMP11P24347 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 AC008132.1-202ENST00000342005 1389 ntBASIC13.78□□□□□ -0.2
MMP11P24347 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MMP11P24347 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP11P24347 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP11P24347 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MMP11P24347 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
MMP11P24347 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
MMP11P24347 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MMP11P24347 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MMP11P24347 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
MMP11P24347 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
MMP11P24347 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 FAM90A7P-201ENST00000382628 1395 ntBASIC13.77□□□□□ -0.21
MMP11P24347 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
MMP11P24347 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 FAM90A23P-201ENST00000400136 1395 ntBASIC13.77□□□□□ -0.21
MMP11P24347 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.77□□□□□ -0.21
MMP11P24347 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.77□□□□□ -0.21
MMP11P24347 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.77□□□□□ -0.21
MMP11P24347 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.77□□□□□ -0.21
MMP11P24347 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.77□□□□□ -0.21
MMP11P24347 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.77□□□□□ -0.21
MMP11P24347 RN7SL720P-201ENST00000488178 304 ntBASIC13.77□□□□□ -0.21
MMP11P24347 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.77□□□□□ -0.21
MMP11P24347 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MMP11P24347 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.77□□□□□ -0.21
MMP11P24347 SCARNA21-201ENST00000517026 139 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms