Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.5□□□□□ -0.09
VCANP13611 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.5□□□□□ -0.09
VCANP13611 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VCANP13611 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 ACP1-207ENST00000439645 605 ntTSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC14.5□□□□□ -0.09
VCANP13611 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC14.5□□□□□ -0.09
VCANP13611 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.5□□□□□ -0.09
VCANP13611 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCANP13611 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.5□□□□□ -0.09
VCANP13611 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 BAK1P2-201ENST00000532665 631 ntBASIC14.5□□□□□ -0.09
VCANP13611 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.5□□□□□ -0.09
VCANP13611 MIR4265-201ENST00000582152 99 ntBASIC14.5□□□□□ -0.09
VCANP13611 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.5□□□□□ -0.09
VCANP13611 AL133467.4-201ENST00000602953 725 ntBASIC14.5□□□□□ -0.09
VCANP13611 KF455155.1-201ENST00000604493 303 ntBASIC14.5□□□□□ -0.09
VCANP13611 AL121992.3-201ENST00000606186 346 ntBASIC14.5□□□□□ -0.09
VCANP13611 AC010776.3-201ENST00000617349 424 ntBASIC14.5□□□□□ -0.09
VCANP13611 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.5□□□□□ -0.09
VCANP13611 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.49□□□□□ -0.09
VCANP13611 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.49□□□□□ -0.09
VCANP13611 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC14.49□□□□□ -0.09
VCANP13611 PHBP10-201ENST00000416467 784 ntBASIC14.49□□□□□ -0.09
VCANP13611 SRP9P1-201ENST00000445874 261 ntBASIC14.49□□□□□ -0.09
VCANP13611 AC005740.1-201ENST00000515639 522 ntBASIC14.49□□□□□ -0.09
VCANP13611 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.49□□□□□ -0.09
VCANP13611 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC14.49□□□□□ -0.09
VCANP13611 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC14.49□□□□□ -0.09
VCANP13611 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 KHSRPP1-201ENST00000427983 1768 ntBASIC14.49□□□□□ -0.09
VCANP13611 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VCANP13611 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 LILRP2-202ENST00000413572 1383 ntBASIC14.49□□□□□ -0.09
VCANP13611 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VCANP13611 AC015813.5-201ENST00000624641 1514 ntBASIC14.49□□□□□ -0.09
VCANP13611 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC14.49□□□□□ -0.09
VCANP13611 AC023051.2-201ENST00000541141 460 ntBASIC14.49□□□□□ -0.09
VCANP13611 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC14.49□□□□□ -0.09
VCANP13611 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VCANP13611 AL158032.2-201ENST00000616818 195 ntBASIC14.49□□□□□ -0.09
VCANP13611 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VCANP13611 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCANP13611 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.49□□□□□ -0.09
VCANP13611 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.48□□□□□ -0.09
VCANP13611 AL359219.1-201ENST00000556311 934 ntBASIC14.48□□□□□ -0.09
VCANP13611 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.48□□□□□ -0.09
VCANP13611 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.48□□□□□ -0.09
VCANP13611 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.48□□□□□ -0.09
VCANP13611 AC063977.2-201ENST00000601996 421 ntBASIC14.48□□□□□ -0.09
VCANP13611 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.48□□□□□ -0.09
VCANP13611 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 AL118508.1-201ENST00000613502 2345 ntBASIC14.48□□□□□ -0.09
VCANP13611 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCANP13611 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.48□□□□□ -0.09
VCANP13611 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms