Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TOP2AP11388 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC24.41■■□□□ 1.5
TOP2AP11388 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 AC007279.1-201ENST00000448547 837 ntBASIC24.4■■□□□ 1.5
TOP2AP11388 RN7SL684P-201ENST00000465665 294 ntBASIC24.4■■□□□ 1.5
TOP2AP11388 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC24.4■■□□□ 1.5
TOP2AP11388 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC24.4■■□□□ 1.5
TOP2AP11388 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC24.4■■□□□ 1.5
TOP2AP11388 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 FTLP5-201ENST00000586853 534 ntBASIC24.4■■□□□ 1.5
TOP2AP11388 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC24.4■■□□□ 1.5
TOP2AP11388 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC24.4■■□□□ 1.5
TOP2AP11388 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
TOP2AP11388 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TOP2AP11388 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC24.4■■□□□ 1.5
TOP2AP11388 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TOP2AP11388 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC24.4■■□□□ 1.5
TOP2AP11388 KRT8P30-201ENST00000432100 650 ntBASIC24.4■■□□□ 1.5
TOP2AP11388 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC24.4■■□□□ 1.5
TOP2AP11388 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 SRP14-208ENST00000560773 468 ntTSL 3 BASIC24.4■■□□□ 1.5
TOP2AP11388 RN7SL134P-201ENST00000579756 303 ntBASIC24.4■■□□□ 1.5
TOP2AP11388 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TOP2AP11388 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TOP2AP11388 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TOP2AP11388 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC24.39■■□□□ 1.5
TOP2AP11388 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
TOP2AP11388 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TOP2AP11388 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TOP2AP11388 HTR7P1-202ENST00000624664 4411 ntBASIC24.39■■□□□ 1.49
TOP2AP11388 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
TOP2AP11388 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC24.39■■□□□ 1.49
TOP2AP11388 AC010086.2-201ENST00000428616 226 ntBASIC24.39■■□□□ 1.49
TOP2AP11388 FDPSP7-201ENST00000429043 1054 ntBASIC24.39■■□□□ 1.49
TOP2AP11388 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC24.39■■□□□ 1.49
TOP2AP11388 IGHEP1-201ENST00000521393 651 ntBASIC24.39■■□□□ 1.49
TOP2AP11388 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC24.39■■□□□ 1.49
TOP2AP11388 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC24.39■■□□□ 1.49
TOP2AP11388 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC24.38■■□□□ 1.49
TOP2AP11388 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 AC103702.1-201ENST00000548801 2630 ntBASIC24.38■■□□□ 1.49
TOP2AP11388 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 NHP2P1-201ENST00000335274 462 ntBASIC24.38■■□□□ 1.49
TOP2AP11388 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 AC023141.7-201ENST00000430646 407 ntBASIC24.38■■□□□ 1.49
TOP2AP11388 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC24.38■■□□□ 1.49
TOP2AP11388 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC24.38■■□□□ 1.49
TOP2AP11388 AC091304.3-201ENST00000566500 716 ntBASIC24.38■■□□□ 1.49
TOP2AP11388 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC24.38■■□□□ 1.49
TOP2AP11388 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC24.38■■□□□ 1.49
TOP2AP11388 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC24.38■■□□□ 1.49
TOP2AP11388 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
TOP2AP11388 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC24.38■■□□□ 1.49
TOP2AP11388 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TOP2AP11388 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TOP2AP11388 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TOP2AP11388 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TOP2AP11388 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC24.37■■□□□ 1.49
TOP2AP11388 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TOP2AP11388 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC24.37■■□□□ 1.49
TOP2AP11388 HNRNPA1P10-201ENST00000444945 962 ntBASIC24.37■■□□□ 1.49
TOP2AP11388 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC24.37■■□□□ 1.49
TOP2AP11388 RPL29P2-202ENST00000498671 657 ntBASIC24.37■■□□□ 1.49
TOP2AP11388 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC24.37■■□□□ 1.49
TOP2AP11388 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC24.37■■□□□ 1.49
TOP2AP11388 AC004686.1-201ENST00000605113 538 ntBASIC24.37■■□□□ 1.49
TOP2AP11388 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC24.37■■□□□ 1.49
TOP2AP11388 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TOP2AP11388 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TOP2AP11388 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC24.37■■□□□ 1.49
TOP2AP11388 FMO6P-201ENST00000236166 1620 ntBASIC24.37■■□□□ 1.49
TOP2AP11388 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TOP2AP11388 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms