Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HMGN1P05114 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 KRT18P28-201ENST00000453838 1332 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 USP17L6P-201ENST00000382470 1197 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 DFFBP1-201ENST00000433250 979 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 FTLP10-202ENST00000505798 471 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.2□□□□□ -0.3
HMGN1P05114 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGN1P05114 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 AC138466.3-201ENST00000619983 221 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGN1P05114 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HMGN1P05114 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGN1P05114 AL391825.1-201ENST00000457671 1364 ntBASIC13.2□□□□□ -0.3
HMGN1P05114 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
HMGN1P05114 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 AC072061.1-201ENST00000569710 2234 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 AC087499.6-201ENST00000411576 835 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 AC022137.2-201ENST00000503482 481 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 AC009486.1-201ENST00000569860 813 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 KRT18P8-201ENST00000581937 1246 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.19□□□□□ -0.3
HMGN1P05114 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms