Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC021723.1-201ENST00000486306 515 ntBASIC11.47□□□□□ -0.57
TRGV3P03979 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.47□□□□□ -0.57
TRGV3P03979 AP001267.2-201ENST00000532619 2086 ntBASIC11.47□□□□□ -0.57
TRGV3P03979 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV3P03979 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 KHSRPP1-201ENST00000427983 1768 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 AL590440.2-201ENST00000641973 1595 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 STRCP1-201ENST00000509801 5328 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 TUBB1P2-201ENST00000422712 1306 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 TUBB1P1-201ENST00000503144 1300 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV3P03979 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV3P03979 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV3P03979 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV3P03979 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV3P03979 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV3P03979 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV3P03979 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC132192.2-201ENST00000596206 1147 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC091271.1-201ENST00000611877 1162 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV3P03979 AC041040.2-201ENST00000622926 2899 ntBASIC11.46□□□□□ -0.57
TRGV3P03979 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.46□□□□□ -0.58
TRGV3P03979 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms