Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 AC090643.2-201ENST00000623442 2029 ntBASIC14.12□□□□□ -0.15
KRT6AP02538 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 MBLAC2-202ENST00000514906 1936 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC118758.2-201ENST00000614242 2813 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.11□□□□□ -0.15
KRT6AP02538 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 FAM197Y7-201ENST00000432892 766 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.11□□□□□ -0.15
KRT6AP02538 TTTY23B-201ENST00000442790 549 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 TMEM198B-204ENST00000484016 896 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 USP32P1-208ENST00000506594 1164 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.11□□□□□ -0.15
KRT6AP02538 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 RN7SL713P-201ENST00000582127 302 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.11□□□□□ -0.15
KRT6AP02538 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 AC006453.4-201ENST00000636949 1252 ntBASIC14.11□□□□□ -0.15
KRT6AP02538 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
KRT6AP02538 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KRT6AP02538 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT6AP02538 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT6AP02538 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 AL136309.1-201ENST00000403917 691 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms