Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX2-2O95096 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 KRT18P15-201ENST00000458108 1291 ntBASIC13.34□□□□□ -0.27
NKX2-2O95096 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.34□□□□□ -0.27
NKX2-2O95096 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 RN7SL163P-201ENST00000583100 276 ntBASIC13.34□□□□□ -0.27
NKX2-2O95096 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.34□□□□□ -0.27
NKX2-2O95096 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX2-2O95096 AC004923.1-202ENST00000642106 209 ntBASIC13.34□□□□□ -0.27
NKX2-2O95096 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 AC018735.1-201ENST00000437208 1502 ntBASIC13.34□□□□□ -0.27
NKX2-2O95096 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-2O95096 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-2O95096 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-2O95096 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-2O95096 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-2O95096 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-2O95096 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-2O95096 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
NKX2-2O95096 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
NKX2-2O95096 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
NKX2-2O95096 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 DPM3-202ENST00000368399 517 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-2O95096 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-2O95096 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 AL512310.5-201ENST00000551999 515 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-2O95096 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-2O95096 AC090164.2-201ENST00000611487 516 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 AC091271.1-201ENST00000611877 1162 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 AC092299.1-201ENST00000632679 757 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 AC007952.5-201ENST00000572818 1486 ntBASIC13.33□□□□□ -0.28
NKX2-2O95096 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NKX2-2O95096 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX2-2O95096 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX2-2O95096 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-2O95096 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms