Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.95□□□□□ -0.34
ALX3O95076 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ALX3O95076 BASP1P1-201ENST00000430708 665 ntBASIC12.95□□□□□ -0.34
ALX3O95076 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.95□□□□□ -0.34
ALX3O95076 AC002472.2-201ENST00000442739 958 ntBASIC12.95□□□□□ -0.34
ALX3O95076 AC114812.1-204ENST00000449669 728 ntBASIC12.95□□□□□ -0.34
ALX3O95076 AL589987.1-201ENST00000453380 819 ntBASIC12.95□□□□□ -0.34
ALX3O95076 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ALX3O95076 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.95□□□□□ -0.34
ALX3O95076 AC008738.7-201ENST00000609744 511 ntBASIC12.95□□□□□ -0.34
ALX3O95076 AC004840.1-201ENST00000636359 365 ntBASIC12.95□□□□□ -0.34
ALX3O95076 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ALX3O95076 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALX3O95076 AC015819.3-201ENST00000624305 2674 ntBASIC12.95□□□□□ -0.34
ALX3O95076 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ALX3O95076 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 AC055876.3-201ENST00000431496 288 ntBASIC12.94□□□□□ -0.34
ALX3O95076 ATP5G2P4-201ENST00000442175 420 ntBASIC12.94□□□□□ -0.34
ALX3O95076 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 TSPY16P-201ENST00000449843 468 ntBASIC12.94□□□□□ -0.34
ALX3O95076 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.94□□□□□ -0.34
ALX3O95076 AC138649.4-201ENST00000612222 287 ntBASIC12.94□□□□□ -0.34
ALX3O95076 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.94□□□□□ -0.34
ALX3O95076 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ALX3O95076 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.94□□□□□ -0.34
ALX3O95076 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.94□□□□□ -0.34
ALX3O95076 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALX3O95076 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALX3O95076 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ALX3O95076 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms