Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD2O14647 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD2O14647 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD2O14647 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD2O14647 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.33■□□□□ 0.69
CHD2O14647 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD2O14647 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD2O14647 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD2O14647 PHBP18-201ENST00000546648 813 ntBASIC19.33■□□□□ 0.69
CHD2O14647 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD2O14647 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CHD2O14647 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD2O14647 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD2O14647 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.33■□□□□ 0.68
CHD2O14647 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHD2O14647 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHD2O14647 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD2O14647 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHD2O14647 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHD2O14647 AC024075.2-201ENST00000598112 1473 ntBASIC19.32■□□□□ 0.68
CHD2O14647 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD2O14647 NDUFB2P1-201ENST00000506966 295 ntBASIC19.32■□□□□ 0.68
CHD2O14647 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD2O14647 AC138627.1-201ENST00000641127 1257 ntBASIC19.32■□□□□ 0.68
CHD2O14647 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CHD2O14647 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD2O14647 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHD2O14647 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHD2O14647 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 POP5-201ENST00000341039 913 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD2O14647 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 ASS1P1-201ENST00000402854 1237 ntBASIC19.32■□□□□ 0.68
CHD2O14647 SLC25A15P1-201ENST00000456738 342 ntBASIC19.32■□□□□ 0.68
CHD2O14647 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD2O14647 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 SNX20-205ENST00000610485 557 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD2O14647 AL590556.2-202ENST00000636906 844 ntBASIC19.32■□□□□ 0.68
CHD2O14647 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHD2O14647 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD2O14647 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD2O14647 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD2O14647 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 AC006486.2-201ENST00000624246 2199 ntBASIC19.31■□□□□ 0.68
CHD2O14647 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD2O14647 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHD2O14647 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 AC113398.1-201ENST00000464124 406 ntBASIC19.31■□□□□ 0.68
CHD2O14647 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD2O14647 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CHD2O14647 AC023051.2-201ENST00000541141 460 ntBASIC19.31■□□□□ 0.68
CHD2O14647 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD2O14647 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHD2O14647 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD2O14647 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD2O14647 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD2O14647 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 Z82244.2-201ENST00000632196 448 ntBASIC19.31■□□□□ 0.68
CHD2O14647 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 AIRN-201ENST00000601203 4374 ntBASIC19.31■□□□□ 0.68
CHD2O14647 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHD2O14647 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD2O14647 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CHD2O14647 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHD2O14647 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD2O14647 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD2O14647 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD2O14647 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms