Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AC134698.3-201ENST00000523880 214 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AL161670.2-201ENST00000557650 1227 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 RN7SL574P-201ENST00000581512 297 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AL132994.2-201ENST00000603120 687 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 Z98259.2-201ENST00000641583 609 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 ELK2AP-201ENST00000392510 1007 ntBASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 AC009779.1-201ENST00000551138 283 ntBASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA3F8WFD2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AL354702.1-201ENST00000442006 1960 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 FAM90A7P-201ENST00000382628 1395 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 FAM90A23P-201ENST00000400136 1395 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms