Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
COLCA2A8K830 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
COLCA2A8K830 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
COLCA2A8K830 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 AL162615.1-201ENST00000429893 1653 ntBASIC11.04□□□□□ -0.64
COLCA2A8K830 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.04□□□□□ -0.64
COLCA2A8K830 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.04□□□□□ -0.64
COLCA2A8K830 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC11.04□□□□□ -0.64
COLCA2A8K830 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
COLCA2A8K830 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
COLCA2A8K830 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.03□□□□□ -0.64
COLCA2A8K830 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 DUX4L26-201ENST00000489078 1255 ntBASIC11.03□□□□□ -0.64
COLCA2A8K830 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.03□□□□□ -0.64
COLCA2A8K830 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.03□□□□□ -0.64
COLCA2A8K830 CR392039.2-201ENST00000623182 509 ntBASIC11.03□□□□□ -0.64
COLCA2A8K830 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
COLCA2A8K830 NSUN5P1-202ENST00000421140 1535 ntBASIC11.03□□□□□ -0.64
COLCA2A8K830 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.03□□□□□ -0.64
COLCA2A8K830 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC11.03□□□□□ -0.64
COLCA2A8K830 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COLCA2A8K830 AC233702.3-201ENST00000578656 1387 ntBASIC11.03□□□□□ -0.64
COLCA2A8K830 AL136172.1-201ENST00000598590 1394 ntBASIC11.03□□□□□ -0.64
COLCA2A8K830 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.02□□□□□ -0.64
COLCA2A8K830 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
COLCA2A8K830 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
COLCA2A8K830 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.02□□□□□ -0.64
COLCA2A8K830 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
COLCA2A8K830 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COLCA2A8K830 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
COLCA2A8K830 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.02□□□□□ -0.65
COLCA2A8K830 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
COLCA2A8K830 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COLCA2A8K830 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
COLCA2A8K830 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.02□□□□□ -0.65
COLCA2A8K830 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
COLCA2A8K830 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.02□□□□□ -0.65
COLCA2A8K830 USP17L6P-201ENST00000382470 1197 ntBASIC11.02□□□□□ -0.65
COLCA2A8K830 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COLCA2A8K830 POM121L3P-201ENST00000419331 1163 ntBASIC11.02□□□□□ -0.65
COLCA2A8K830 TSPY5P-201ENST00000426936 936 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms