Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 PYY2-201ENST00000315776 282 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC018463.1-201ENST00000456674 917 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MIR3180-2-201ENST00000581748 88 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AP001065.2-201ENST00000617205 644 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 MIR6858-201ENST00000620733 67 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 PKD1P5-201ENST00000532415 10291 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC015802.1-201ENST00000588104 1449 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 AC232323.1-201ENST00000540724 2099 ntBASIC12.6□□□□□ -0.39
MBD3L3A6NE82 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 USP17L6P-201ENST00000382470 1197 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SCARNA12-201ENST00000459155 270 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 GOLGA2P8-201ENST00000505201 779 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RNA5SP417-201ENST00000516459 108 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms