Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI2Q9Y5P3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 DPM3-202ENST00000368399 517 ntBASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 VDAC1P1-201ENST00000439229 848 ntBASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 NDUFV2P1-201ENST00000596415 907 ntBASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AP000346.4-201ENST00000614827 381 ntBASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI2Q9Y5P3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 AC064801.2-201ENST00000625052 1303 ntBASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 HLA-J-204ENST00000495278 958 ntBASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 AC068587.8-201ENST00000641239 219 ntBASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAI2Q9Y5P3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms