Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC091951.1-201ENST00000512854 2465 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AL592076.1-201ENST00000424448 303 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AC103810.10-201ENST00000606504 343 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 MIR6769A-201ENST00000617340 73 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 COX6A1P2-201ENST00000620597 330 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AC051619.9-201ENST00000623237 597 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AC023024.2-201ENST00000623561 1993 ntBASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.65■□□□□ 0.1
SSX2IPQ9Y2D8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
SSX2IPQ9Y2D8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AC092053.3-201ENST00000641308 4975 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AL627231.1-201ENST00000394467 1125 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 LDHBP1-201ENST00000455730 1119 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AL157813.1-201ENST00000612996 587 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AC104581.4-201ENST00000623126 3052 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 AHCYP4-201ENST00000419201 1315 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 ST20-AS1-201ENST00000560255 4223 ntBASIC15.64■□□□□ 0.09
SSX2IPQ9Y2D8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSX2IPQ9Y2D8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSX2IPQ9Y2D8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSX2IPQ9Y2D8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSX2IPQ9Y2D8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms