Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.58■□□□□ 0.41
HMG20BQ9P0W2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 OR2K2-202ENST00000374428 1038 ntBASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 CEP164P1-201ENST00000455142 418 ntBASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC026803.1-201ENST00000569130 274 ntBASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20BQ9P0W2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AC011498.7-201ENST00000624986 2027 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 ELK2AP-201ENST00000392510 1007 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AC092580.1-201ENST00000433998 658 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 MIR6769A-201ENST00000617340 73 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AC006453.1-201ENST00000636037 1257 ntBASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HMG20BQ9P0W2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20BQ9P0W2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms