Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC026469.1-201ENST00000621095 3306 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CTAGE7P-201ENST00000435712 2436 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AL365330.1-201ENST00000607459 531 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC010536.3-201ENST00000620306 533 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MYCNOS-205ENST00000641950 531 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 DDX3P1-201ENST00000418231 1950 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 LOXL3-201ENST00000264094 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 GBA-204ENST00000428024 1817 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 OTOF-201ENST00000272371 7156 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 EPB42-201ENST00000300215 4553 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 DEDD-210ENST00000490843 1527 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms