Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC134312.5-201ENST00000568031 1313 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC064801.2-201ENST00000625052 1303 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC004899.2-201ENST00000622993 3860 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 RN7SKP175-201ENST00000408472 289 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC011495.1-201ENST00000498085 584 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC027237.1-201ENST00000560942 655 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 LINC02560-201ENST00000596379 459 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC132938.4-201ENST00000623835 848 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
POLR2J2Q9GZM3 AC009093.10-201ENST00000641956 1442 ntBASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AC011498.7-201ENST00000624986 2027 ntBASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AL138709.1-201ENST00000614840 1693 ntBASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AC068587.3-201ENST00000526613 355 ntBASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.47□□□□□ -0.25
POLR2J2Q9GZM3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms