Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AC055876.2-201ENST00000531834 546 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SORD2P-201ENST00000558556 1069 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AP005019.2-201ENST00000615104 511 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AP001002.3-201ENST00000623482 206 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 KRT18P28-201ENST00000453838 1332 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SLC7A15P-201ENST00000424028 1363 ntBASIC12.52□□□□□ -0.41
NICN1Q9BSH3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.52□□□□□ -0.41
NICN1Q9BSH3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC020658.7-201ENST00000624274 2442 ntBASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MIR497HG-202ENST00000572453 3838 ntBASIC12.51□□□□□ -0.41
NICN1Q9BSH3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC098850.1-201ENST00000419919 790 ntBASIC12.51□□□□□ -0.41
NICN1Q9BSH3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC093004.1-201ENST00000508850 424 ntBASIC12.51□□□□□ -0.41
NICN1Q9BSH3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NICN1Q9BSH3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms