Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PSME2P2-201ENST00000453033 700 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 GOLGA2P8-201ENST00000505201 779 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC022532.1-201ENST00000624563 1728 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 RPL18AP15-201ENST00000430258 517 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC005777.1-201ENST00000588332 187 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 KRT8P38-201ENST00000441370 1430 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
COL12A1Q99715 RNA5SP420-201ENST00000516997 137 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC12.31□□□□□ -0.44
COL12A1Q99715 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 AC148476.1-201ENST00000622182 705 ntBASIC12.31□□□□□ -0.44
COL12A1Q99715 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.31□□□□□ -0.44
COL12A1Q99715 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.31□□□□□ -0.44
COL12A1Q99715 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL12A1Q99715 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AL591499.1-201ENST00000307155 1153 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC12.3□□□□□ -0.44
COL12A1Q99715 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.3□□□□□ -0.44
COL12A1Q99715 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC12.3□□□□□ -0.44
COL12A1Q99715 MIR5193-201ENST00000584510 109 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AC048382.6-201ENST00000621980 1223 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 KRT8P18-201ENST00000413425 1445 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AC069061.4-201ENST00000581294 1347 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
COL12A1Q99715 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 AL031590.1-202ENST00000641466 1737 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 MROH4P-201ENST00000431302 1578 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 AC092903.1-201ENST00000466506 262 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 RPL10P8-201ENST00000522888 313 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 AC015818.3-201ENST00000583797 589 ntBASIC12.3□□□□□ -0.44
COL12A1Q99715 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
COL12A1Q99715 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL12A1Q99715 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms